About

Yeolab Bioinformatics.

Projects

eCLIP pipeline defined with CWL

Merge two replicate eCLIP peaks (get reproducible peaks)

De-novo motif finding and kmer enrichment using eCLIP peaks

Splicing maps for eCLIP/RNA-SEQ integration

RNA editing pipeline in Singularity/CWL

De-novo motif finding using eCLIP peaks

Annotate a BED6 file

Decomposition package for bioinformatics

Clustering package for bioinformatics

Cheatsheets, misc docs, etc.

Onboarding users onto TSCC

Using SSHFS

Docker

Useful commands for me